PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK32834.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family ERF
Protein Properties Length: 230aa    MW: 26103.3 Da    PI: 7.6678
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK32834.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.1e-2071120255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ykGVr+++ +g+WvAeIr p++   r+r +lg+f taeeAa a+++a+ +l+g
  KFK32834.1  71 LYKGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFETAEEAALAYDQAAFQLRG 120
                 59******9.**********965...5************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.04E-2271128IPR016177DNA-binding domain
PROSITE profilePS5103222.44571128IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-3171129IPR001471AP2/ERF domain
SMARTSM003801.6E-3671134IPR001471AP2/ERF domain
PfamPF008471.5E-1472120IPR001471AP2/ERF domain
PRINTSPR003677.3E-117283IPR001471AP2/ERF domain
CDDcd000188.71E-3372129No hitNo description
PRINTSPR003677.3E-1194110IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
METASLSKFS ESNMSFGFNQ TKPLGLNQLT PYQINQIQNQ LNHKGNTISN LSPNPILMKK  60
FSSSSSKAKK LYKGVRQRHW GKWVAEIRLP KNRTRLWLGT FETAEEAALA YDQAAFQLRG  120
DLKRLNFPNI RHEDINPLPS SVNAKLQAIC KSMRKTEETE LVLPKTEHSD SDNSPRTEEN  180
SFSVGYSSSE QGITFIDFSD SEFEEIGSFK LVQFPSMEID WDAISKLSDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-2270128160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002880436.11e-121hypothetical protein ARALYDRAFT_900671
SwissprotQ9SIE41e-114ERF56_ARATH; Ethylene-responsive transcription factor ERF056
TrEMBLA0A087GSI21e-171A0A087GSI2_ARAAL; Uncharacterized protein
STRINGscaffold_400172.11e-121(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM26802768
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22200.15e-97ERF family protein